CDS

Accession Number TCMCG007C31348
gbkey CDS
Protein Id XP_009144345.1
Location complement(8151433..8152611)
Gene LOC103868001
GeneID 103868001
Organism Brassica rapa

Protein

Length 392aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009146097.3
Definition presenilin-like protein At2g29900 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category T
Description subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors
KEGG_TC -
KEGG_Module M00682        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
KEGG_ko ko:K04505        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04310        [VIEW IN KEGG]
ko04330        [VIEW IN KEGG]
ko04722        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05165        [VIEW IN KEGG]
map04310        [VIEW IN KEGG]
map04330        [VIEW IN KEGG]
map04722        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05165        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004175        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005798        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008233        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0070011        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCGAAACCAGCAAAGACCGAGAAGCAGCATCCTGGACTCCCTAGGCGAAGAGCTCATCGGAATCCTCACGCCCGTCTCCATATGCATGTTCACCGTCGTCCTCCTCGTCTGCCTCCTAAACTCCGACCCATCCTCCTCCTCCTCCTTCTCCTCTATCGCCACCGCCGCTTACTCCGAAACCGACTCCGACTCCCCCTGGGACAAGCTCCTCGGCGCCTTCCTCAACTCCCTCGTCTTCGTCGCCGCCATCACCGTCGCCACGTTCCTCCTCGTCCTCCTCTTCTACCTCAGATGCGTCACCTTCCTCAAACTCTACATGGGCTTCTCGGCCTTGGTCGTTTTAGCCAACCTCGGCGGAGAAATCTCAATCCTTTTGATCGATCGTTTCCGATTCCCCATCGATTCCCTCACGTTCTCGATCCTGTTATTTAACTTCTCCGTCGTGGGTGTGTTCGCCGTGTTCATGTCGAGGTTCTCGATCTTGATCACTCAGGGCTACTTGGTCGTGATCGGTGTCTTGGTCGCTTACTTCTTTACGATGCTGCCCGAGTGGACTACTTGGGTTTTGCTTGTCGCTTTGGCGCTTTACGACCTCGCTGCTGTTCTCTTACCTGTCGGTCCGTTGCGTCTCCTTGTCGAGATGGCTATCTCCAGAGACGAGGATATACCCGCTCTGGTGTATGAAGCGAGGCCCGTGATCCGGGATGACTCGCGTTTGGTGCAGAGGAGAGTTTGGAGAGAACAGAGATCCAACGTGAATGATGATGACGTGGAGAACAATGTGGTTAGAGCAGAGGAGGAGGAGGAACAAAGATCGGAAGAGATATCTGTACCCTTGATTGATAGTAGTAGTAGTAGTAGTAGTAGACCTGAGACTTTTCTCGAAGGGATTGGGTTGGGGGCGTCTGGTGCGATCAAGTTGGGGCTTGGGGATTTCATCTTCTATAGTGTTTTGGTTGGGAGAGCTGCCATGTATGATTTGATGACGGTTTACGCTTGCTACTTGGCCATTATTGCTGGTTTAGGGGTTACGTTGATGCTCTTGTCTGTGTATCAAAAGGCTTTGCCTGCTCTTCCTGTCTCCATCATGTTAGGTGTTGTGTTTTACTTTCTCGCGAGGTTGTTCTTAGAAGTTTTTGTTGTGCAGTGTTCTTCAAACCTTGTCATGTTTTAA
Protein:  
MDRNQQRPRSSILDSLGEELIGILTPVSICMFTVVLLVCLLNSDPSSSSSFSSIATAAYSETDSDSPWDKLLGAFLNSLVFVAAITVATFLLVLLFYLRCVTFLKLYMGFSALVVLANLGGEISILLIDRFRFPIDSLTFSILLFNFSVVGVFAVFMSRFSILITQGYLVVIGVLVAYFFTMLPEWTTWVLLVALALYDLAAVLLPVGPLRLLVEMAISRDEDIPALVYEARPVIRDDSRLVQRRVWREQRSNVNDDDVENNVVRAEEEEEQRSEEISVPLIDSSSSSSSRPETFLEGIGLGASGAIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIIAGLGVTLMLLSVYQKALPALPVSIMLGVVFYFLARLFLEVFVVQCSSNLVMF